Examples

C++


#include <complex> #include <iostream> #include <vector>

#include “spfft/spfft.hpp”

int main(int argc, char** argv) {

const int dimX = 2; const int dimY = 2; const int dimZ = 2;

std::cout << “Dimensions: x = ” << dimX << “, y = ” << dimY << “, z = ” << dimZ << std::endl

<< std::endl;

// Use default OpenMP value const int numThreads = -1;

// Use all elements in this example. const int numFrequencyElements = dimX * dimY * dimZ;

// Slice length in space domain. Equivalent to dimZ for non-distributed case. const int localZLength = dimZ;

// Interleaved complex numbers std::vector<double> frequencyElements; frequencyElements.reserve(2 * numFrequencyElements);

// Indices of frequency elements std::vector<int> indices; indices.reserve(dimX * dimY * dimZ * 3);

// Initialize frequency domain values and indices double initValue = 0.0; for (int xIndex = 0; xIndex < dimX; ++xIndex) {

for (int yIndex = 0; yIndex < dimY; ++yIndex) {
for (int zIndex = 0; zIndex < dimZ; ++zIndex) {

// init with interleaved complex numbers frequencyElements.emplace_back(initValue); frequencyElements.emplace_back(-initValue);

// add index triplet for value indices.emplace_back(xIndex); indices.emplace_back(yIndex); indices.emplace_back(zIndex);

initValue += 1.0;

}

}

}

std::cout << “Input:” << std::endl; for (int i = 0; i < numFrequencyElements; ++i) {

std::cout << frequencyElements[2 * i] << “, ” << frequencyElements[2 * i + 1] << std::endl;

}

// Create local Grid. For distributed computations, a MPI Communicator has to be provided spfft::Grid grid(dimX, dimY, dimZ, dimX * dimY, SPFFT_PU_HOST, numThreads);

// Create transform. // Note: A transform handle can be created without a grid if no resource sharing is desired. spfft::Transform transform =

grid.create_transform(SPFFT_PU_HOST, SPFFT_TRANS_C2C, dimX, dimY, dimZ, localZLength,

numFrequencyElements, SPFFT_INDEX_TRIPLETS, indices.data());

// Transform backward transform.backward(frequencyElements.data(), SPFFT_PU_HOST);

// Get pointer to buffer with space domain data. Is guaranteed to be castable to a valid // std::complex pointer. Using the internal working buffer as input / output can help reduce // memory usage. double* spaceDomainPtr = transform.space_domain_data(SPFFT_PU_HOST);

std::cout << std::endl << “After backward transform:” << std::endl; for (int i = 0; i < transform.local_slice_size(); ++i) {

std::cout << spaceDomainPtr[2 * i] << “, ” << spaceDomainPtr[2 * i + 1] << std::endl;

}

std::vector<double> spaceDomainVec(2 * transform.local_slice_size());

// Transform backward transform.backward(frequencyElements.data(), spaceDomainVec.data());

// Transform forward transform.forward(spaceDomainVec.data(), frequencyElements.data(), SPFFT_NO_SCALING);

// Note: In-place transforms are also supported by passing the same pointer for input and output.

std::cout << std::endl << “After forward transform (without normalization):” << std::endl; for (int i = 0; i < numFrequencyElements; ++i) {

std::cout << frequencyElements[2 * i] << “, ” << frequencyElements[2 * i + 1] << std::endl;

}

return 0;

}

C


#include <stdio.h> #include <stdlib.h>

#include “spfft/spfft.h”

int main(int argc, char** argv) {

const int dimX = 2; const int dimY = 2; const int dimZ = 2;

printf(“Dimensions: x = %d, y = %d, z = %dnn”, dimX, dimY, dimZ);

/* Use default OpenMP value */ const int numThreads = -1;

/* use all elements in this example. */ const int numFrequencyElements = dimX * dimY * dimZ;

/* Slice length in space domain. Equivalent to dimZ for non-distributed case. */ const int localZLength = dimZ;

/* interleaved complex numbers / double frequencyElements = (double*)malloc(2 * sizeof(double) * numFrequencyElements);

/* indices of frequency elements / int indices = (int*)malloc(3 * sizeof(int) * numFrequencyElements);

/* initialize frequency domain values and indices */ double initValue = 0.0; size_t count = 0; for (int xIndex = 0; xIndex < dimX; ++xIndex) {

for (int yIndex = 0; yIndex < dimY; ++yIndex) {
for (int zIndex = 0; zIndex < dimZ; ++zIndex, ++count) {

/* init values */ frequencyElements[2 * count] = initValue; frequencyElements[2 * count + 1] = -initValue;

/* add index triplet for value */ indices[3 * count] = xIndex; indices[3 * count + 1] = yIndex; indices[3 * count + 2] = zIndex;

initValue += 1.0;

}

}

}

printf(“Input:n”); for (size_t i = 0; i < dimX * dimY * dimZ; ++i) {

printf(“%f, %fn”, frequencyElements[2 * i], frequencyElements[2 * i + 1]);

} printf(”n”);

SpfftError status = 0;

/* create local Grid. For distributed computations, a MPI Communicator has to be provided */ SpfftGrid grid; status = spfft_grid_create(&grid, dimX, dimY, dimZ, dimX * dimY, SPFFT_PU_HOST, numThreads); if (status != SPFFT_SUCCESS) exit(status);

/* create transform */ SpfftTransform transform; status = spfft_transform_create(&transform, grid, SPFFT_PU_HOST, SPFFT_TRANS_C2C, dimX, dimY,

dimZ, localZLength, numFrequencyElements, SPFFT_INDEX_TRIPLETS, indices);

if (status != SPFFT_SUCCESS) exit(status);

/* grid can be safely destroyed after creating all transforms */ status = spfft_grid_destroy(grid); if (status != SPFFT_SUCCESS) exit(status);

/**********************************************

Option A: Reuse internal buffer for space domain

***********************************************/

/* Get pointer to buffer with space domain data. Is guaranteed to be castable to a valid

complex type pointer. Using the internal working buffer as input / output can help reduce memory usage.*/

double* spaceDomain; status = spfft_transform_get_space_domain(transform, SPFFT_PU_HOST, &spaceDomain); if (status != SPFFT_SUCCESS) exit(status);

/* transform backward */ status = spfft_transform_backward(transform, frequencyElements, SPFFT_PU_HOST); if (status != SPFFT_SUCCESS) exit(status);

printf(“After backward transform:n”); for (size_t i = 0; i < dimX * dimY * dimZ; ++i) {

printf(“%f, %fn”, spaceDomain[2 * i], spaceDomain[2 * i + 1]);

} printf(”n”);

/******************************************

Option B: Use external buffer for space domain

*******************************************/ spaceDomain = (double*)malloc(2 * sizeof(double) * dimX * dimY * dimZ);

/* transform backward */ status = spfft_transform_backward_ptr(transform, frequencyElements, spaceDomain); if (status != SPFFT_SUCCESS) exit(status);

/* transform forward */ status = spfft_transform_forward_ptr(transform, spaceDomain, frequencyElements, SPFFT_NO_SCALING); if (status != SPFFT_SUCCESS) exit(status);

/* Note: In-place transforms are also supported by passing the same pointer for input and output. */

printf(“After forward transform (without normalization):n”); for (size_t i = 0; i < dimX * dimY * dimZ; ++i) {

printf(“%f, %fn”, frequencyElements[2 * i], frequencyElements[2 * i + 1]);

}

/* destroying the final transform will free the associated memory */ status = spfft_transform_destroy(transform); if (status != SPFFT_SUCCESS) exit(status);

free(spaceDomain); free(frequencyElements);

return 0;

}

Fortran


program main

use iso_c_binding use spfft implicit none integer :: i, j, k, counter integer, parameter :: dimX = 2 integer, parameter :: dimY = 2 integer, parameter :: dimZ = 2 integer, parameter :: maxNumLocalZColumns = dimX * dimY integer, parameter :: processingUnit = 1 integer, parameter :: maxNumThreads = -1 type(c_ptr) :: grid = c_null_ptr type(c_ptr) :: transform = c_null_ptr integer :: errorCode = 0 integer, dimension(dimX * dimY * dimZ * 3):: indices = 0 complex(C_DOUBLE_COMPLEX), dimension(dimX * dimY * dimZ):: frequencyElements real(C_DOUBLE), dimension(2*dimX * dimY * dimZ):: spaceDomain complex(C_DOUBLE_COMPLEX), pointer :: spaceDomainPtr(:,:,:) type(c_ptr) :: realValuesPtr

counter = 0 do k = 1, dimZ

do j = 1, dimY
do i = 1, dimX

frequencyElements(counter + 1) = cmplx(counter, -counter) indices(counter * 3 + 1) = i - 1 indices(counter * 3 + 2) = j - 1 indices(counter * 3 + 3) = k - 1 counter = counter + 1

end do

end do

end do

! print input print *, “Input:” do i = 1, size(frequencyElements)

print *, frequencyElements(i)

end do

! create grid errorCode = spfft_grid_create(grid, dimX, dimY, dimZ, maxNumLocalZColumns, processingUnit, maxNumThreads); if (errorCode /= SPFFT_SUCCESS) error stop

! create transform ! Note: A transform handle can be created without a grid if no resource sharing is desired. errorCode = spfft_transform_create(transform, grid, processingUnit, 0, dimX, dimY, dimZ, dimZ,&

size(frequencyElements), SPFFT_INDEX_TRIPLETS, indices)

if (errorCode /= SPFFT_SUCCESS) error stop

! grid can be safely destroyed after creating all required transforms errorCode = spfft_grid_destroy(grid) if (errorCode /= SPFFT_SUCCESS) error stop

! ********************************************* ! Option A: Reuse internal buffer for space domain ! *********************************************

! set space domain array to use memory allocted by the library errorCode = spfft_transform_get_space_domain(transform, processingUnit, realValuesPtr) if (errorCode /= SPFFT_SUCCESS) error stop

! transform backward errorCode = spfft_transform_backward(transform, frequencyElements, processingUnit) if (errorCode /= SPFFT_SUCCESS) error stop

call c_f_pointer(realValuesPtr, spaceDomainPtr, [dimX,dimY,dimZ])

print *, “” print *, “After backward transform:” do k = 1, size(spaceDomainPtr, 3)

do j = 1, size(spaceDomainPtr, 2)
do i = 1, size(spaceDomainPtr, 1)

print *, spaceDomainPtr(i, j, k)

end do

end do

end do

! ****************************************** ! Option B: Use external buffer for space domain ! ******************************************

! transform backward errorCode = spfft_transform_backward_ptr(transform, frequencyElements, spaceDomain) if (errorCode /= SPFFT_SUCCESS) error stop

! transform forward errorCode = spfft_transform_forward_ptr(transform, spaceDomain, frequencyElements, SPFFT_NO_SCALING) if (errorCode /= SPFFT_SUCCESS) error stop

print *, “” print *, “After forward transform (without normalization):” do i = 1, size(frequencyElements)

print *, frequencyElements(i)

end do

! destroying the final transform will free the associated memory errorCode = spfft_transform_destroy(transform) if (errorCode /= SPFFT_SUCCESS) error stop

end